Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTEEFVNKEDALKNYNVKEFRTPDGYTSDMILTTVKEVNGKPTLHILLIKRSSTNAEGRPNIEGGKWAVPGGFVDENESADQAAERELEEETSLT------GIPLIPFGVFDKPGRDPRGWIISRAFYAIVPPEALE-KRAAGDDAADIGLFSMTEALELP---LAFDHLDMLKKAYSAITEEFLLTTAICDFLPETFSAELLYQTLDGCTKPGILPDEVEFMENIEYLPYLEKVGELYRFNADAEAGSIYF |
2R5W Chain:A ((6-349)) | MYDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTPNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLADYFYQEQKWQDELRKNVYKHAKNNNSIAIVGHIKDSSSYYIRSFPEWDYIGVDNYKNFNATEFRQKFYNGIISKQYMCSNDPKLGTYNFLTKFMDTQVYQDLVAENNYVIEYKRLWLKAPFKPN-FVTVDALVIV--------NDHILMVQR-------KAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEECG----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33449 for 1137 contacts (-29.4/contact) +
2D Compatibility (PS) -16914 + (NN) -13354 + (LL) 5376
1D Compatibility (HY) -7200 + (ID) 2050
Total energy: -67591.0 ( -59.45 by residue)
QMean score : 0.418
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