Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVPARPTPLFADIADVSRRLAETGYLPDTATATAVFLADRLGKPLLVEGPAGVGKTELARAVAQATGSGLVRLQCYEGVDEARALYEWNHAKQILRIQAGSGDWEATKTDVFSEEFLLQRPLLTAIRRTEPTVLLIDETDKAD--IEIEGLLLEVLSDFAVTVPELGTLTATRAPFVLLTSNATRELSEALKR--RC-LYLHIDFPTPELERRILLSRVPELPEHFAEELVRIIGVLRGMQLKKVPSIAETIDWGRTVLALGLDTIDDAVVAATLGVVLKHQSDQQRATGELRLN |
| 2X8A Chain:A ((12-204)) | ----------IGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV--G---------------------------ESERAVRQVFQRAKNSAPCVIFFDEVDALCPSVRVVNQLLTEMDGLE----------ARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKN-------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2X8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67342 for 1332 contacts (-50.6/contact) +
2D Compatibility (PS) -18294 + (NN) -10017 + (LL) 9560
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -95993.0 ( -72.07 by residue)
QMean score : 0.492
|
|
|