Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKG--YSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS-----
1QGH Chain:A ((7-156))
----VDTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIELTDKEGDDVTNDMLIAFKASIDKHIWMFKAFLGKAPLE
General information:
TITO was launched using:
RESULT:
Template:
1QGH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37466 for 1057 contacts (-35.4/contact) +
2D Compatibility (PS) -15644 + (NN) -9731 + (LL) 220
1D Compatibility (HY) -14800 + (ID) 3100
Total energy: -80521.0 ( -76.18 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_1QGH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QGH-query.scw
PDB file :
Tito_Scwrl_1QGH.pdb
: