Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGIT-VRPT---I------EGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGKGGGDKLAEELNVPLLGRIPLKQPDWD-KDQFAPSVYDE-NHPIGEIYQDIAKKIDAKMSVQV |
| 1G3Q Chain:A ((2-235)) | ---------------------------------------------------------------------------------------------------------GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVLAGEANVEDAIYMTQFDNVYVLPGAVDWE--HVL----KADPRKLPEVIKSLK-DKFDFILIDCPAGLQLDAMSAML--SGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRS--DR--------DIPPEAAEDVMEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEIEK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129152 for 2025 contacts (-63.8/contact) +
2D Compatibility (PS) -23760 + (NN) -5013 + (LL) 10792
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -157383.0 ( -77.72 by residue)
QMean score : 0.497
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