Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIMMLPMEQKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLRSPQVTGGSWDLRIRPSKDSSSFRQAQCLRKDPGANNHLESQGVRGTAGDADRELRGPSEKATAGQPRVTLLPTPHVSGLSQEFESHWPEIAERSPCVAGVIPVIYYSVLLGLGLPVSLLTAVALARLATRTRRPSYYYLLALTASDIIIQVVIVF--AGFLLQGAVLARQVPQAVVRTANILEFAANHASVWIAILLTVDRYTALCHPLHHRAASSPGRTRRAIAAVLSAALLTGIPFYWWLDMWRDTDSPRT---------------LDEVLKWAHCLTVYFIPCGVFLVT----NSAIIHRLRRRGRSGLQPRVGKSTAILLGITTLFTLLWAP-RVFVMLYHMYVAPVHRDWRVHLALDVANMVAMLHTAANFGLYCFVSKTFRATVRQVIHDAYLPCTLASQPEGMAAKPVMEPPGLPTGAEV |
| 4N6H Chain:A ((132-413)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------YSAVCAVGLLGNVLVMFGIVRY-TKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLS----IDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPI-----MVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTL-VDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRK---PCG------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205120 for 1920 contacts (-106.8/contact) +
2D Compatibility (PS) -26589 + (NN) -6835 + (LL) 11544
1D Compatibility (HY) -23200 + (ID) 3050
Total energy: -253250.0 ( -131.90 by residue)
QMean score : 0.264
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