Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGFMGNLLILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLILISIAIVRYHMIKHPI--SNNLTANHGYFLIATVWTLGFAICSPLPVFHSLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLSNKENRLEE-NEMINLTLHPSKKSGPQVK--LSGSHKWSYSFIKKHRRRYSKKTACVLPAPERPSQENHSRILPENFGSVRS--QLSSSSKFIPGVPTCFEIKPEENSDVHELRVKRSVTRIKKRSRSVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKL-VYCICHLLGMMSCCLNPILYGFLNNGIKADLVSLIHCLHM |
4IAR Chain:A ((20-396)) | ----------------------------------------KVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLP-PFFWRQA------SECVVNTDH------------ILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIADLEDNWETLND--NLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKS------PDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKY--------LAARERKATKTLGIILGAFIVCWLPFFIISLVMPI--------WFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -221584 for 2678 contacts (-82.7/contact) +
2D Compatibility (PS) -35445 + (NN) -4241 + (LL) 5528
1D Compatibility (HY) -28800 + (ID) 3950
Total energy: -288492.0 ( -107.73 by residue)
QMean score : 0.140
|
|
|