Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVNLTSMSGFLLMGFSDERKLQILHALVFLVTYLLALTGNLLIITIITVDRRLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMGNGYISLVQCILQVFFFIALASSEVAILTVMSYDRYAAICQPLHYETIMDPRACRHAVIAVWIAGGLSGLMHAAINFSIPLCGKRVIHQFFCDVPQMLKL----ACSYEFINEIALAAFTTSAAF-ICLISIVLSYIRIF----STVLRIPSAEGRTKVFSTCLPHLFVATFFLSAAGFEFLRLP---------SDSSSTVDLVFSVFYTV--IPPTLNPVIYSLRNDSMKAALRKMLSKEELPQRKMCLKAMFKL |
| 2VT4 Chain:A ((10-298)) | ----------------WEAGMSLLMALVVL----LIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWA-------ISALVSF-LPI----MMHWWRDEDPQALKCYQDPGCC-DFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR----------------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223420 for 1806 contacts (-123.7/contact) +
2D Compatibility (PS) -26481 + (NN) -10625 + (LL) 4732
1D Compatibility (HY) -24400 + (ID) 3300
Total energy: -283494.0 ( -156.97 by residue)
QMean score : 0.242
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