Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINTSYVEITTFFLVGMPGLEYAHIWISIPICSMYLIAILGNGTILFIIKTEPSLHEPMYYFLSMLAMSDLGLSLSSLPTVLSIFLFNAPEISSNACFAQEFFIHGFSVLES-------SVLLIMSFDRFLAIHNPLRYTSILTTVRVAQ-IGIVFSFKSMLLVLPFPFTLRNLRYCKKNQLSHSYCLHQDVMKLACSD---NR----IDVIYGFFGALCLMVDFILIAVSYTLILKTVLGI--ASKKEQL------KALNTCVSHICAVIIFYLPIINLAVVHRFARHVSPLINVLMANVLLLVPPLTNPIVYCVKTKQIRVRVVAKLCQRKI |
| 2YCY Chain:A ((23-284)) | -------------------------------------LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI------MMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMI-FVALRV-YREAKEQIR--DRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191838 for 1600 contacts (-119.9/contact) +
2D Compatibility (PS) -23791 + (NN) -4902 + (LL) 5168
1D Compatibility (HY) -24400 + (ID) 3250
Total energy: -243013.0 ( -151.88 by residue)
QMean score : 0.203
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