Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLGSLGNSSSSVSATFLLSGIPGLERMHIWISIPLCFMYLVSIPGNCTILFIIKTERSLHEPMYLFLSMLALIDLGLSLCTLPTVLGIFWVGAREISHDACFAQLFFIHCFSFLES-------SVLLSMAFDRFVAICHPLHYVSILTNTVIGRIGLVSLGRSVALIFPLPFMLKRFPYCGSPVLSHSYCLHQEVMKLACADMKANSIYGMFVIVSTVGIDSLLILFSYALILRTV-----LSIASRAERF------KALNTCVSHICAVLLFYTPMIGLSVIHRFGKQ-APHLVQVVMGFMYLLFP-PVMNPIVYSVKTKQIRDRVTHAFCY |
2YCY Chain:A ((14-283)) | -------------------------------MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRAR-AKVIICTVWAISALVSFLPIMMHWWRDEDPQALK---CYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR-DRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFV--AFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207732 for 1731 contacts (-120.0/contact) +
2D Compatibility (PS) -24213 + (NN) 948 + (LL) 3816
1D Compatibility (HY) -26400 + (ID) 3100
Total energy: -256681.0 ( -148.28 by residue)
QMean score : 0.154
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