Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAMKLLNQSQVSEFILLGLTSSQDVEFLLFALFSVIYVVTVLGNLLIIVTVFNTPNLNTPMYFLLGNLSFVD--MTLASFATPKVILNLLKKQKVISFAGCFTQIFLLHLLGGVEMVLLVSMAFDRYVAICKPLHYMTIMNKKVCVLLVVTSWLLGLLHSGFQIPFAVNLPFCGPNVVDSIFCDLPLVTKLAC-IDIYFVQVVIVANSGIISLSC--FIILLI----SYSLILITIKNHSPTGQS-----KARSTLTAHITVVILFFGPC------IFIYIWPFGNHSVDKFLAVFYTI------ITPILNPIIYTLRNKEMKISMKKLWRAFVNSREDT |
| 2I36 Chain:A ((55-317)) | --------------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTT--TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMAL---------ACAAP---PLVGWSRY--IPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF---THQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185639 for 1685 contacts (-110.2/contact) +
2D Compatibility (PS) -23324 + (NN) 589 + (LL) 5644
1D Compatibility (HY) -23200 + (ID) 3550
Total energy: -229480.0 ( -136.19 by residue)
QMean score : 0.199
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