Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METANYTKVTEFVLTGLSQTPEVQLVLFVIFLSFYLFIL-----PGNILIICTISLDPHLTSPMYFLLANLAFLDIWYS----SITAPEMLIDFFVERKIISFDGCIAQLFFLHFAGASEMFLLTVMAFDLYTAICRPLHYATIMNQRLCCILVALSWRGGFIHSIIQVALIVRLPF-CGPNELDSYFCDITQVVRIACANTF--PEELV-----MICSSGLISVVCLIALLMSYAFLLALFKKLSGSGEN---TNRAMSTCYSHITIVVLMF--------GPSIYIYARPFDSFS-LDKVVSVFNTLIFPLRNPIIYTLRNKEVKAAMRKLVTKYILCKEK |
| 3DQB Chain:A ((40-317)) | -------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFV----FGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS----------------NFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229323 for 1850 contacts (-124.0/contact) +
2D Compatibility (PS) -25126 + (NN) -6961 + (LL) 6188
1D Compatibility (HY) -22000 + (ID) 3200
Total energy: -280422.0 ( -151.58 by residue)
QMean score : 0.245
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