Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERGNQTEVGNFLLLGFAEDSDMQLLLHGLFLSMYLVTII---GNLLIILTISSDSHLHTPMYFFLSNLSFADICFTSTTVPKMLVNIQTQSKMITFAGCLTQIFFFIAFGCLDNLLLTMT-------AYDRFVAICYPLHYTVIMNPRLCGLLVLGSWCISVMGSLLETLTILRLSFCTNMEIPHFFC--DPSEVLKLACSDTFINN--------IVMYFVTIVLGVFPLCGILFSYSQIFSSVLRVSARG------QHKAFSTCGSHLSVVSLFYGTGLGVYLSSAVTPPSRTSLAASVMYTM------VTPMLNPFIYSLRNKDMKGSLGRLLLRATSLKEGTIAKLS |
| 2YCZ Chain:A ((9-297)) | ------------------------QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM----MHWWRDEDPQALKCYQDP------GCCD-FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCW---LPFFLVNIVNVFNR-DLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170588 for 1694 contacts (-100.7/contact) +
2D Compatibility (PS) -24995 + (NN) 2596 + (LL) 4560
1D Compatibility (HY) -27600 + (ID) 3550
Total energy: -219577.0 ( -129.62 by residue)
QMean score : 0.092
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