Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASTESSLLRSLGLSPGPGSSEVELDCWFDEDFKFILLPVSYAVVFVLGLGLNAPTLWLFIFRLRPWDATATYMFHLALSDTLYVLSLPTLIYYYAAHNHWPFGTEICKFVRFLFYWNLYCSVLFLTCISVHRYLGICHPLRALRWGRPRLAG-----LLCLAVWLVVAGCLVPNLFFVTTSNKGTTVLCHDTTRPEE----FDHYVHFSSAVMGLLFGVPCLVTLVCYGLMARRLY-QPLPGSA------QSSSRLRSLRTIAVVLTVFAVCFVPFHITRTIYYLARLLEADCRVLNIVNVVYKVTRPLASANSCLDPVLYLLTGDKYRRQLRQLCGGGKPQPRTAASSLALVSLPEDSSCRWAATPQDSSCSTPRADRL |
| 2KSB Chain:A ((10-318)) | ------------DLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL------QPRLSATATKVVICV-IWVLALLLAFPQGYYSTTETMPSRVVCM-IEWPEHPNKIYEKVYHICVTV--LIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFH----IFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTISTVVGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260429 for 2306 contacts (-112.9/contact) +
2D Compatibility (PS) -29819 + (NN) -16591 + (LL) 2040
1D Compatibility (HY) -33600 + (ID) 3750
Total energy: -342149.0 ( -148.37 by residue)
QMean score : 0.208
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