Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLESHLIIYFLLAVIQFLLGIFTNGIIVVVNGIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIVIFFIEFIMCSANCAILLFINELELWLATWLGVFYCAKVASVRHPLFIWLKMRISKLVPWMILGSLLYVSMICVFHSKYAGFMVPYFLRKFFSQNATIQKEDTLAIQIFSFVAEFSVPLLIFLFAVLLLIFSLGRHTRQMRNTVAGSRVPGRGAPISALLSILSFLILYFSHCMIKVFLSSLKFHIRRFIFLFFILVIGIYPSGHSLILILGNPKLKQNAKKFLLHSKCCQ |
2KOE Chain:A ((4-38)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSAE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5514 for 178 contacts (-31.0/contact) +
2D Compatibility (PS) -3548 + (NN) -829 + (LL) 27204
1D Compatibility (HY) -2400 + (ID) 200
Total energy: 14713.0 ( 82.66 by residue)
QMean score : 0.295
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