Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIESFNDLAPVIHQSRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESKDVYFAEFGWLDPNGKTKVPDSKTFWQAEKTELTNQKAVNLFWNNENGIVFRMKVSLDNNYMFKVEQIVENNTKDNVVLVPYGKINRKRDNINESYWISHEGILGAFDNKLEEWTYKNVAKKHLIKASTSKKNWFGFADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKNILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLK-NFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDS-------LKQHKETIALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFTLFGLFNYNFPISIGILPIILGITMIIQQKIGEKGQTNKDD--IQANVMKFFPYISIFIFSSFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGINVENTNS |
| 3WO6 Chain:A ((11-232)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIWNHFFVYPMSWLITTVANLLNGSYGLSIIIVTILIRLALLPLTLKQQKSMRAMQVIRPEMEAIQKKYKEKASKDPKVQQEMQKELLGLYQKHGVNPMAGCLPLFIQLPILMAFYFAIMRTEEIRYHTF-LWF-DLG--QPDYI-----------------LPFVAGITTYFQFKMTMSH------QMQMKVMLYVMPVMIIIAGLSLPSALSLYWVIGNIFMIIQTY------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149398 for 1317 contacts (-113.4/contact) +
2D Compatibility (PS) -19799 + (NN) -6590 + (LL) 24292
1D Compatibility (HY) -23600 + (ID) 3100
Total energy: -178195.0 ( -135.30 by residue)
QMean score : 0.296
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