Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MKRESDQCNEESNRQSTTHIHVYNRSLDFLGYLLLRYCIDSLLVRCGHTIVIYGNTTNQSRENKKKDSEDSRKLLALGIVAAVVCVGFPC
3R66 Chain:A ((7-102))
TTQIEVGPGATNATINFEAGILECYERFSWQRALDYPGQDRLHRLKRKLESRIKTHNKSEPENKRMSLEERKAIGVKMMKVLLF-MDPSAGIEGFEP
General information:
TITO was launched using:
RESULT:
Template:
3R66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5690 for 533 contacts (10.7/contact) +
2D Compatibility (PS) -9093 + (NN) 32 + (LL) -172
1D Compatibility (HY) 2400 + (ID) 800
Total energy: -1943.0 ( -3.65 by residue)
QMean score : -0.026
(partial model without unconserved sides chains):
PDB file :
Tito_3R66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R66-query.scw
PDB file :
Tito_Scwrl_3R66.pdb
: