Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQKQYNLGKSLKCKKKSLLTKVKNLLRFQEEKKSVDEKSRDIAKPREIKSEKSIDNKKNELVIAKIY---------
1SFC Chain:C ((7-83))
MRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGK
General information:
TITO was launched using:
RESULT:
Template:
1SFC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18659 for 266 contacts (70.1/contact) +
2D Compatibility (PS) -7291 + (NN) -3867 + (LL) 0
1D Compatibility (HY) 2400 + (ID) 350
Total energy: 9551.0 ( 35.91 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_1SFC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFC-query.scw
PDB file :
Tito_Scwrl_1SFC.pdb
: