Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYMKNEQDIRSQGVYYSAGLRSYLTKVYNYMALALGITGLIAFLTVFFDLFQVIYSNPVLSIVVILSPIVLVFYMSHRLQYLSAQSTVTVFFLFSVLMGLSLSYIFIVYTTENIARAFFITSIMFGSMALYGNSTKKDLTSMGSFLIMGIWGLIIASIVNLFLGSSPLYFAISFISVIVFTLMTAYDAQRIKDVYYRYNDGSEAVTTKLAIFGATNLYFDFINVFLNLLRLLNLFNNRD |
| 1ZDA Chain:A ((6-17)) | --FNMQQQRRFYEALHDPNLNEEQRNAKIKSIRDD------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 223 for 40 contacts (5.6/contact) +
2D Compatibility (PS) -1216 + (NN) -272 + (LL) 18708
1D Compatibility (HY) 400 + (ID) 50
Total energy: 17793.0 ( 444.82 by residue)
QMean score : 0.496
|
|
|