Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYPDFTLENKLSGVIAGVDEVGRGPLAGPVMSAAVVFT--NRNIIIEGIN--DSKKLTAKNRQVLYEKIISVAKF-------------GIGMASVAEINSYNILQATKLSMERALVNLGIELDYVLVDG------------NQPPKVKWQVKSIVKGDSLSVSVAAASIVAKVARD------QLMQELHNQYPEY-----NWYKNKGYGTKGHIDAINLYGVTEHHRKSFAPILNSTKRALL |
| 3P5J Chain:A ((29-246)) | --------------CVLGVDEAGRGPVLGP-MVYAICYCPLSRLADLEALKVA---TLTENERERLFAKMEEDGDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTAAGLIQYALDQNVNVTQVFVDTVGMPETYQARLQQHFPGIEVTVKA--KADSLFPVVSAASIFAKVARDKAVKNWQFVENLQDLDSDYGSGYPNDPKTKAWLRK-HVDPV--FGFPQFVRFSW-----STAQAIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43775 for 1207 contacts (-36.3/contact) +
2D Compatibility (PS) -18568 + (NN) -7151 + (LL) 1428
1D Compatibility (HY) -10800 + (ID) 3000
Total energy: -81866.0 ( -67.83 by residue)
QMean score : 0.338
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