Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIIINHEKNGKLTDFGKAVLSDRYLIE-----NESYQDLFIRIA-NYYSDNKEHAQRLYDYMSNLWFMPSTPILSNGGTNRGLPISCFLNET-EDSLQGIVDLWNENVWLAARGGGIGSYWGNLRSIGESVKGS-GKTSGIVPFIVVQNALTLAISQGSLRR-GSSAVYLPVSHPEIEEFLDIRKPTGGDPNRKALNIHHAVIVDDRFMQAVESDLEWNLISPYNNKVIS---------------------TIKARDIWIKILTARIETGEPYIIFLDAINNNKPESYKRLNLDIKMSNLCSEITLTTGYDHLNKLRTAVCCLSSVNLEYY-------KEWRHNELFIEDIMRFLDNVLEDFINKAPDEIQRAKYSAMRERSIGLGVMGFHSFLQSKMVPFESVTAQQWNKKIFKYLRKQADMVSKKLAEEKGA-----------------CLDAKEINLME-------------RFTHKLAIAPTASISIIAGNTSPGIEPYAANVFTQKTLTGSFVVRNKFLQKLLAEKNQNNDKIWSSISTNEGSVQHLDFLNKHEKLTFRTAYELDQRWIIEHASDRTPYICQSQSVNLFLPANVHKRYLHKIHMLAWKKGLKS-LYYCRSQSMQRADKVSHDIFKASEMFQQRTDIDYSECLSCQ |
| 3S8B Chain:A ((132-746)) | --NSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHGRDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECALISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALYLEPWHADIFDFIDIRKNHGKEEIR-ARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLSDCYGDEFEALYTRYEKEGRGKTIKAQKLWYSILEAQTETGTPFVVYKDAC--NRKSNQKNLGV-IKSSNLCCEIVEYSAPDE-----TAVCNLASVALPAFIETSEDGKTSTYNFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDSEEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDWDTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNE-CFEPVTSNMY--------FQVVNPYLLRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVYIDQSHSLNLFLRAPTMGK-LTSMHFYGWKKGLKTGMYYLRTQ---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242895 for 4689 contacts (-51.8/contact) +
2D Compatibility (PS) -58292 + (NN) -26894 + (LL) 3276
1D Compatibility (HY) -33600 + (ID) 9600
Total energy: -368005.0 ( -78.48 by residue)
QMean score : 0.366
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