Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNMANLPEVTVRDLARSGVHFGHKISRWNAKMAPYIYGVHQENRIHIIDLRKTLPLLQAAMKVLYNVAFQGGRILFVGTKFQALDIIASEAIRCGQYYVNYRWLGGMLTNWGTISSSIKTLVQYEKVL-NAENSILTKKELGNIEKKRQKLDKALGGIREMGAVPDVLFIIDTNKEHIAVKEAEKLEIPVVAILDTNSDPDGITYPIPGNDDSRKSIELYCRLAADSILAGMESSLARSGVKVGDIKDEEFIQEKGDSIIRTKKGRSKVYKEDEKEVVTNEDESR |
1N34 Chain:B ((7-229)) | ----------VKELLEAGVHFGHERKRWNPKFARYIYA--ERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQ------ARGGVVEPSPSYALVQ--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N34.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116636 for 1835 contacts (-63.6/contact) +
2D Compatibility (PS) -23860 + (NN) -5328 + (LL) 3168
1D Compatibility (HY) -20000 + (ID) 5500
Total energy: -168156.0 ( -91.64 by residue)
QMean score : 0.483
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