Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILSILLIFFCIRLVSLKISINHSKQLKADGAVEYGVKNSKFLAI-THVLIYVLAGVEAFINKDTFSFANGIG--------LVIL-----IFAYIMLFMVIKTLGGI---WTLKLFILPNHPIIKSGLYKITKHPNYFLN---IIPELIGVLLLTHATYTTILLVPYAYFLYVRIKQEEKLMNI------------------
2W69 Chain:A ((7-203))
-----AMEDFVRQCFNPMIVELAEKAMKEYGE-DLKIETNKFAAICTHLEVCFMYSDFHFINEQGESIVVELDDPNALKHRFEIIEGRDRTMAWTVVNSICNTTGAEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSTHIHIFSFTGEEMAT--KADYTLDEESRARIKTRLFTIRQEMANRGLWDSFRQSER
General information:
TITO was launched using:
RESULT:
Template:
2W69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111003 for 1051 contacts (-105.6/contact) +
2D Compatibility (PS) -16235 + (NN) -148 + (LL) 1336
1D Compatibility (HY) -6800 + (ID) 1600
Total energy: -134450.0 ( -127.93 by residue)
QMean score : 0.132
(partial model without unconserved sides chains):
PDB file :
Tito_2W69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W69-query.scw
PDB file :
Tito_Scwrl_2W69.pdb
: