Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDQQTIYQYIQNGKIEEALQALFGNIEEDPTIIENYINAGIVLADANEIEKAERFFQKALTIDPKNGVVFYNLANVYYNQQRYQEAIKLYQQALQTEIEQVDCNYMIGMAFNQLESFKLALPYLMTAAELDKDKDAEVQFQYGLVLCQLEMFNEAITQLKHVLTIDKNHVDARYNLGLALFMKNEDIDEAITHFKEAVTIDPKHLLSQHALKTFTKMKEEE
3AS5 Chain:A ((11-174))
------------------------------------YRDKGISHAKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP-INFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFS-YEQMGRHEEALPHFKKANELD--------------------
General information:
TITO was launched using:
RESULT:
Template:
3AS5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87467 for 1303 contacts (-67.1/contact) +
2D Compatibility (PS) -17592 + (NN) -12904 + (LL) 4828
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -125135.0 ( -96.04 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3AS5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AS5-query.scw
PDB file :
Tito_Scwrl_3AS5.pdb
: