Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSKSLEALHHVKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFDKLQSFDCHSPKASMLVNGYHPLHAELEERLADLLEFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHASGIFSTKIKPN-QVIFFSHNDIKDLKQKLFNAPKNKLKFIAIEGVYSMDASIAPYDFYEIIQETPNAFLIVDEAHSFGTIGENLLGFLEYHRIKEKDKIIKLSTFSKALASYGACVLAPLQVIEFLTNRAKSVIYTTAL--SLLDTALTLAHLEYFIAQKQE--LKNELSKHQQIIFETLGVRTPT-----GFFTLEFENNPALLNAQYFLKEKGFLVGAIRPPTVSKP--LLRVSLSLKNSLEDTKELANALLDYSKIQSSFKSG |
| 4BMK Chain:A ((95-419)) | -------------------------------NYMGMTFDPDVIAAGKEALEKFGSGTNGSRMLNGTFHD-HMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHAS-IYDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFV-VGTFSASVGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGL--KAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVIG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192794 for 2691 contacts (-71.6/contact) +
2D Compatibility (PS) -33987 + (NN) -10683 + (LL) 3096
1D Compatibility (HY) -22800 + (ID) 4450
Total energy: -261618.0 ( -97.22 by residue)
QMean score : 0.487
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