Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSLEWGLLIFLILVFLVGIGYYVFMVFSSKD-----
1S5L Chain:T ((1-31))
MET------ITYVFIFACIIALFFFAIFFREPPRITK
General information:
TITO was launched using:
RESULT:
Template:
1S5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9676 for 96 contacts (-100.8/contact) +
2D Compatibility (PS) -2662 + (NN) -2325 + (LL) 616
1D Compatibility (HY) -4800 + (ID) 300
Total energy: -19147.0 ( -199.45 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_1S5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S5L-query.scw
PDB file :
Tito_Scwrl_1S5L.pdb
: