Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVENSGIEPLT-SCVQSRCSPS------------------------ |
| 3KDR Chain:A ((7-297)) | AVTTRAEALTIPAVLRARNLLSTTVARTPLVCDGTLPPFVPVAAPPGAATMQTPFHRMLATADDLLFNGVACWALDRDESGTCIGAIHIPLDTWQIEENTVRVNGKAVDPMEVCIFVGIHGGLLTHASETFTDARNLVRAAARVAQNPAALIELRQTNNAQLSPDDVDRIINGYVAARRGRNSGVGFSSSGLEVHEHEMAKENLLIEGRNAAAVDVARAMNVPAAFIDATVGQNAASRMIELVTFGVEPL-MSAIEARLNQPDMHADHLANPLKFDPAALLDAIPT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -776 for 67 contacts (-11.6/contact) +
2D Compatibility (PS) -2193 + (NN) -1853 + (LL) 52
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -6270.0 ( -93.58 by residue)
QMean score : 0.326
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