Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTEILTIMLVVSVLMGLVGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKRQKN
2I68 Chain:A ((92-104))
--------------MLICAGVLIINLL------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2I68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3849 for 42 contacts (-91.6/contact) +
2D Compatibility (PS) -1314 + (NN) -88 + (LL) 4348
1D Compatibility (HY) -2000 + (ID) 150
Total energy: -3053.0 ( -72.69 by residue)
QMean score : 0.352
(partial model without unconserved sides chains):
PDB file :
Tito_2I68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I68-query.scw
PDB file :
Tito_Scwrl_2I68.pdb
: