Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYKRFKGKHANIVIEIISLLEKGVKKAQEILEKPDAGSYTQLENSSGDTPIKADLALDKFLEETFLSLENVKSVFSEEKETPVTKE---NGSYLIAYDPLDGSSVMEANFLVGTIIGVYEKD-----------YKAQNLVASLYVVFGHKIELVVAL-EEVYRYAFYQNKFHFI---ETIVLENKGKIIA-SGGNQKDFSLGLKKALE--GFFAEN---YRLRYSGSMVADVHHVLVKKGGMFSY------PQKKLRKLFEVFPLALMVEKAKGEAFYFDKGVKKRLLDQSVESYHEKSECYLASPHEA----QILEKHLKGE |
4GWX Chain:A ((64-334)) | --------------------------------------------NVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVNGVNCFMLDPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLV-YGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTG----KEAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHA--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121934 for 1919 contacts (-63.5/contact) +
2D Compatibility (PS) -25868 + (NN) -11042 + (LL) 3664
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -176630.0 ( -92.04 by residue)
QMean score : 0.352
|
|
|