Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFINIEKKWQEFWWKNKSFEPKDDFNLP-KKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKHGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKKAMLNWCPNDKTVLANEQVIDGRCWRC-DTEVIQKELYQYYLKITNYAEELLKDLETLENHWPSQVLTMQKNWIGKSSGLQFGFKIADECLKACNNIQEIEVFTTRADTIYGVTYIAIAPEHPL-VEHAIKRVSQEDSKMIKAILNTTQRER---ALEKKGAFLGIYAIHPLTKQKIPVWVANFALANYGSGALMGVPACDERDFEFANLYHIPIKVITQSP-QNLPHTKEE------ILKNSGEWSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGI--VPETQLPVTLP-----EDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDTMDTFIQSSWYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQLITQGMVL-----------------------------------------------KDG-------AKMSKSKGNVVSPKEILKKYGADAVRLFILFAAPPAKELEWNDNALEGAHRFIKRLYDKA----NAITPTTSKPEFKEVGLNEAQKLARKKVYEALKKSHEIFNKAESAYAFNTLIASCMEALNALNAQSDEQILCEGYFV----LLQILEPMIPHTAWELSERLFKRENFKP--IEVDESALIEDFMTLGLTINGKRRAELKVNINASKEEIIILAKKELEKYLENASVKKEIYVPNKLVNFVTA |
2V0C Chain:A ((9-813)) | -----IEAKWQRFWEEKGFMKAKD---LPGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHEDTPVEKRELEQWYLRITAYAERLLKDLEGL--NWPEKVKAMQRAWIGRSEGAEILFPVEGKEVR-------IPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQAEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGLPIKKVIERPGEPLPEPLERAYEEPGIMVNSGPFDGTESEEGKRKVIAWLEEKGLGKGRVTYRLRDWLISRQRYWGTPIPMVHCEACGVVPVPEEELPVLLPDLKDVEDIRPKGK-SPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSWYYLRYTDPHNDR--LPFDPEKANAWMPVDQYIGGVEHAVLHLLYSRFFTKFLHDLGMVKVEEPFQGLFTQGMVLAWTDFGPVEVEGSVVRLPEPTRIRLEIPESALSLEDVRKMGAELRPHEDGTLHLWKPAVMSKSKGNGVMVGPFVKEQGADIARITILFAAPPENEMVWTEEGVQGAWRFLNRIYRRVAEDREALLETSGV--FQAEALEGKDRELYGKLHETLKKVTEDLE----ALRFNTAIAALMEFLNALYEYRKDRPVTPVYRTAIRYYLQMLFPFAPHLAEELWHWFWPDSLFEAGWPELDEKALE-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -368835 for 6086 contacts (-60.6/contact) +
2D Compatibility (PS) -75888 + (NN) -29227 + (LL) 6416
1D Compatibility (HY) -65200 + (ID) 18000
Total energy: -550734.0 ( -90.49 by residue)
QMean score : 0.494
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