Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKKYLICSDIDGTLLRQDQTVSKKTRDLIQTLEKDGHIFSISTGRMYRSAREVGFQVSSSGHVIASNGSYAAIR-DEQLLKTTLEEKAIRSTYDIMSDFDLPLFFFSTNTLFYTKEPPAFFQNLADKSRLDTGHNSFSLVSINEK---GIFDENMHQFLNAIVVAEEDASKLTE-VRAALNEANGIRVLSSHHNNLEILPANSDKKTAVEALGKHYNIPRERIITFGDGENDIGMLQYAGTGVAMANASDNVKAAANHLTDTNEADGVYKFLKEFIS |
| 3DNP Chain:A ((6-273)) | ---KQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKK--KVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAFPAVDVIRV---NDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEY-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88859 for 2273 contacts (-39.1/contact) +
2D Compatibility (PS) -28116 + (NN) -9599 + (LL) 308
1D Compatibility (HY) -21200 + (ID) 3050
Total energy: -150516.0 ( -66.22 by residue)
QMean score : 0.457
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