Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQITFYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKHSGETNYVLVNAKDEQVINQSENKSTTEPGAELSSRQKAK |
2JXW Chain:A ((3-27)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKGRWVEGITSEG--YHYYYDLISGAS----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6644 for 98 contacts (-67.8/contact) +
2D Compatibility (PS) -2687 + (NN) -1248 + (LL) 15804
1D Compatibility (HY) 0 + (ID) 100
Total energy: 5125.0 ( 52.30 by residue)
QMean score : 0.369
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