Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSRKQSIQKTQLSKTKKQTLNVTIDRPIG--YTDKFGNV---YPLNYGFVEGVIGGDGEEQDVYVLSRKISEPIDTFQGDLIAVITRNDDV-EDKWVVAAPNENFTIEEIREK-------------VHFIEQYFDSEIKLI
1INO Chain:A ((32-145))
------------------------IDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLE----
General information:
TITO was launched using:
RESULT:
Template:
1INO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4424 for 538 contacts (-8.2/contact) +
2D Compatibility (PS) -10087 + (NN) -4291 + (LL) 2740
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -21212.0 ( -39.43 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_1INO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1INO-query.scw
PDB file :
Tito_Scwrl_1INO.pdb
: