Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDP--DPHSNQKLRFVIERAKTYN------VPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVE--GKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFERLIDALEDLEDVQKVYHNVELED |
2YP7 Chain:A ((72-199)) | ------------------------------------GDPQCDGFQNKKWDLFVERSKAYSNCYPYDVPDYASLRSLVASSGTLEFNNESFNWTGVTQNGTSSACKRKSNNSFFSRLNWLTHLKFKYPALNVTMPNNEKFDKLYIWGVHHPGTDNDQIF------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17122 for 514 contacts (33.3/contact) +
2D Compatibility (PS) -12351 + (NN) -7251 + (LL) 10364
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: 2434.0 ( 4.74 by residue)
QMean score : 0.076
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