Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGKKGVAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK
1NNX Chain:A ((65-89))
------------------------------------------------------NVDIDHKRWNG----VTVTPKDTVEIQGE----------------
General information:
TITO was launched using:
RESULT:
Template:
1NNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7929 for 80 contacts (-99.1/contact) +
2D Compatibility (PS) -2608 + (NN) 84 + (LL) 4784
1D Compatibility (HY) 400 + (ID) 200
Total energy: -5469.0 ( -68.36 by residue)
QMean score : 0.095
(partial model without unconserved sides chains):
PDB file :
Tito_1NNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NNX-query.scw
PDB file :
Tito_Scwrl_1NNX.pdb
: