Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYIAGIDIGNSTTEVALAMANSSKEAAFVASAITDTTGIKGTKQNLHGIFKALRLALEKVNATTEDLAEIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGLGMGSGVTVLLDDVTSKSKDADYIVIIPKTVDFEDAAKQINTYVENGYQITAAILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIATVFHLNSDETKNIIPVARALIGNRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVNVAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLAVDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEAEAAILGA--LTTPGTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEIGLEDRYLAEDIKKYPLAKVESIFHIRHEDGTVQFFDTPLSPTVFAKVVIVKPDGFVPIPGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSALDFEIPQLITDALSHYSLVAGRGNI-------------RGKEGPRNAVATGLILAGGAKA |
| 2YCH Chain:A ((140-374)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVQVMVAAARQEAVAGVLEAL----RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLD-LLAAEEVKRTY-------------------------------------------------GRIYDAIRPVLVE-LTQELRRSLEFFRIQL---SPEVGYLLGGGSKLRGLASLLTDTLG-VNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73420 for 1377 contacts (-53.3/contact) +
2D Compatibility (PS) -20883 + (NN) -7632 + (LL) 27648
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -82187.0 ( -59.69 by residue)
QMean score : 0.338
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