Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VATKHEQILKYIENLAVGEKISVRKIAKNLSVSEGTAYRAIKDAEIIGFVSTIKRVGTLRIERKQKDSIEKLTFAEIVNMIDGQVLGGRAGLYKSLNKFVIGAMTVEAMERYTDAGNLLIVGNRVSAHELALKRGAAVL--ITGGFDTDDEVKQLADE--KELPILSTSYDTFTVATMINRAIYDQLIKK--------------EVVFVEDILTPLETTAFLSTSDKVEDWHKMEEAT-GHSRFPVVNRAMRLTGMVTSKDILEKNPSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPVVKDDLTLIGIVSRQDILKSMQMIQKQPQVGETIDDTIANQLSEKTDTGEEADYEFKVSPQMTNSLGTLSYGVFTQVVCEVVQQKLFSMKKRNVAIENVTMYFLKPVQMDATIIIKPRILEMGRKAGKLDVELYLEGILTGKAIVACQMMER |
3ORG Chain:A ((371-625)) | ----------------------------------------------------------------------------------------------------------------------------IVPGSYAVVGAAAFTAGVTRALSCAVIIFEVTGQIRHLVPVLISVLLAVIVGNAFNRSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHV--VVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTER-GKLVGIVEREDVAYGYSN--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ORG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67208 for 1152 contacts (-58.3/contact) +
2D Compatibility (PS) -19044 + (NN) -4651 + (LL) 21024
1D Compatibility (HY) -14400 + (ID) 1700
Total energy: -85979.0 ( -74.63 by residue)
QMean score : 0.366
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