Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNVKVYVTLKKSVLDPQGVAVKDAAKSMGYEEVEDVRIGKFMELKVAK---SDRDIHEVLNEMCDKLLTNPVMEDYRYEIEEA
3BUA Chain:A ((98-174))
---IKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNLAHPVIQNFSYE----
General information:
TITO was launched using:
RESULT:
Template:
3BUA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3130 for 451 contacts (6.9/contact) +
2D Compatibility (PS) -7374 + (NN) 314 + (LL) 776
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -7704.0 ( -17.08 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_3BUA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BUA-query.scw
PDB file :
Tito_Scwrl_3BUA.pdb
: