Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKSKLELLFTKISHVMNVWQATFFAAVSWVLALITIQTIYLWSISIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRLMRQRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQARNDLITNVSHDLRTPLTSI-LGYLSYIHEDRYRDEIELRYYTELVYGKARHLHKLIDDLFSYTRLDSVDYQLKKDELDIVELLRQLVAEYDGRAAERNMQIVEHFDANKLIIGGDGNQIMRLFENLFSNALRYGEGNKQIDVSAKKEDNMAVVRVTNYGEEIPNVDLPYLFERFYKVDKNRTTTGTGLGLAIAKSIVEKHGGIVTAE-SKKRQTSFIVKLPLI |
4BIY Chain:A ((83-294)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------LLSDISHELRTPLTRLQLGTALLRRRSGESKELE-RIETE-----AQRLDSMINDLLVMSR-NQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYS--HTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD-------TGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103010 for 1446 contacts (-71.2/contact) +
2D Compatibility (PS) -21268 + (NN) -3573 + (LL) 17800
1D Compatibility (HY) -11600 + (ID) 3000
Total energy: -124651.0 ( -86.20 by residue)
QMean score : 0.471
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