Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILKKKLKAGILLQAIVLAAVFTLVLQFYLARILATERQYHSQIEASKAYLTAQLAYKTIEGDSISGKCYFTGGYASYLQEGNYLQVKVTLDKGGNYNHKFYRKTDTLQVPLK---SNDNKASHKH |
3MBW Chain:A ((112-164)) | ----------------------------------------------------------------------FPGGASSCKETFNLYYAESDLDYGTNFQKRLFTKIDTI-APDEITVSSDFEARHVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5740 for 177 contacts (32.4/contact) +
2D Compatibility (PS) -5368 + (NN) -1192 + (LL) 7596
1D Compatibility (HY) -1200 + (ID) 850
Total energy: 4726.0 ( 26.70 by residue)
QMean score : 0.085
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