Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIVILWLMSKGLGTDVKTFYTQAYKPGGDLIFWFLNPATIAFAVPLYKKNDVVKKYWVEILSSLVIGMIVSLMLIVAISKMVGLSQVGIASMLPQAATTAIALPITAAIGGNTAVTAMACILNAVIIYA-LGKKLVSFFH-LNDSKIGAGLGLGTSGHTVGAAFALELGELQGAMAAIAVVVIGLVVDLVIPIFSHLIGLL-------
1UDD Chain:A ((1-215))--------MRVMITDKLRRDSEQIWKKIFE----HPFVVQLYSG----------------TLPLEKFKFYVLQDFNYLVGLTRALAVISSKAEY---PLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNSAYMDFMLATAYKGNIIEGLTALLPCFWSYAEIAEYHKDKLRDNPIKIYREWGKVYLS-----NEYLNLVGRLRKIIDSSGHSGYDRLRRIFITGSKFELAFWEMAWRGG


General information:
TITO was launched using:
RESULT:

Template: 1UDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -198394 for 1572 contacts (-126.2/contact) +
2D Compatibility (PS) -21630 + (NN) -5750 + (LL) 3268
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: -229606.0 ( -146.06 by residue)
QMean score : 0.298

(partial model without unconserved sides chains):
PDB file : Tito_1UDD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UDD-query.scw
PDB file : Tito_Scwrl_1UDD.pdb: