Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MKDYVTTQILSILGILAGACLSYLKFAQGNSLLGIIW-AAFALMYIVRLYKAYQKQKKEKP----
1G6Z Chain:A ((-2-69))
SPKQEEYEVERIVDEKLDRNGAVKLYRIRWLNYSSRSDTWEPPENLSGCSAVLAEWKRRKRRLKGSNS
General information:
TITO was launched using:
RESULT:
Template:
1G6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 799 for 310 contacts (2.6/contact) +
2D Compatibility (PS) -6071 + (NN) 2226 + (LL) 0
1D Compatibility (HY) 7200 + (ID) 150
Total energy: 4004.0 ( 12.92 by residue)
QMean score : -0.151
(partial model without unconserved sides chains):
PDB file :
Tito_1G6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G6Z-query.scw
PDB file :
Tito_Scwrl_1G6Z.pdb
: