Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFKILTDSTSDLDEKWAQEHNVDIIGLTIELDGKTY-ETVGDEKITSDFLLERMQ-E-GAKPTTSQINVGQFEEVFSTYAENDHALLYLALSSHLSGTYQSATIAREMVLDKYPDAQIEIVDTMAASCGEGVLAMLATKERQEGKSLEEVKQKIESLLPKLNTYFLVDDLNHLMRSGRLSKGAAIIGSVAKIKPLLKLDSEGKLVPFAKTRGRKKGIKEIVTQATKTL-----SYSTLIIAYSGEKDSAQVMKEQLLADERIE--EVIIRPLGPVISAHVGSGALALFSLGEENR |
| 3NYI Chain:A ((4-294)) | -MYKIVSDSACDLSKEYLEKHDVTIVPLSVSFDGETYYRDGV--DITRDECYQRMVDDPKLFPKTSLPSVESYADVFRSFVEQGFPVVCFTITTLFSGSYNSAINAKSLVLEDYPDANICVIDSKQNTVTQALLIDQFVRMLEDGLSFEQAMSKLDALMASARIFFTVGSLDYLKMGGRIGKVATAATGKLGVKPVIIMK-DGDIGLGGIGRNRNKLKNSVLQVAKKYLDENNKDNFIVSVGYGYDKEEGFEFMKEVESTLDVKLDSETNVAIGIVSAVHTGPYPIGLGVIRKYET |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132200 for 2461 contacts (-53.7/contact) +
2D Compatibility (PS) -30687 + (NN) -9089 + (LL) 208
1D Compatibility (HY) -16000 + (ID) 3500
Total energy: -191268.0 ( -77.72 by residue)
QMean score : 0.522
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