Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METRNEKFRRLSEARMTKVFSILNILRNQSDKSKYTFSKSDIEELFGALEQKGEEIKEFFTSPITIKTVNLKNSFHYSVVDTSNDKEVSFKKLSTARVEKIFSLMNLIANLSNKSNYNYSDWEVEELFSAYDEEVKKCKVFFEEKRTVFKYS |
1JOG Chain:A ((77-134)) | ----------------------------------------------------------------------------------AYGFKDILREALRFGLIGDMSKWVAYRDMRNITSHTYDQEKAMAVYAQIDDFLIESSFLLEQLRQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7536 for 274 contacts (27.5/contact) +
2D Compatibility (PS) -5573 + (NN) -282 + (LL) 6732
1D Compatibility (HY) 400 + (ID) 150
Total energy: 8663.0 ( 31.62 by residue)
QMean score : 0.314
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