Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKECRDFYRQIQHTYNDIAVREDAVLSSILLSASNGLIKTSDVPRVAYELTQQLENNEIEKSFESL--ATVKELKKSAKKLSERYEQNKVTTGLLSKVFGNH
2KL8 Chain:A ((1-85))
-------MEMDIRFRGDDLEAFEKALKEMIRQA-----------RKFAGTVTYTLDGNDLEIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2KL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6053 for 547 contacts (11.1/contact) +
2D Compatibility (PS) -8868 + (NN) -821 + (LL) 968
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -4818.0 ( -8.81 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_2KL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KL8-query.scw
PDB file :
Tito_Scwrl_2KL8.pdb
: