Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLEIAKV----YLQGLGLASITVILVGIIWVFWRAKKNIDKTARERQSVLYDVLLIALMTAPILAFAFVAIILMIKA
4JQU Chain:B ((1-54))
MLLDKFHVDLNEDMSNLSFKDLD-IEERKRLLVWQARKNLETKLQS------DKDLQSLLT-----------------
General information:
TITO was launched using:
RESULT:
Template:
4JQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31527 for 248 contacts (-127.1/contact) +
2D Compatibility (PS) -4977 + (NN) 1090 + (LL) 3320
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -35944.0 ( -144.94 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_4JQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JQU-query.scw
PDB file :
Tito_Scwrl_4JQU.pdb
: