Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQSLNKTVEFQTTGVSYLGMGNKVGKFLVGDQALEFYNDKNVNDYIQIPWTSINQIGANVSRKKISRHFEVFTDQ---GKFLFASKDSGTILKHARRHIGDDKVVKLPTLIQTILKIFKFKK
1MIX Chain:A ((330-397))
---------------------------LGITKECVMRVDEKTKEVIQEWSLTNIKRWAASP------KSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYID----------------------
General information:
TITO was launched using:
RESULT:
Template:
1MIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36781 for 382 contacts (-96.3/contact) +
2D Compatibility (PS) -6810 + (NN) -2657 + (LL) 3980
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -45468.0 ( -119.03 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_1MIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MIX-query.scw
PDB file :
Tito_Scwrl_1MIX.pdb
: