Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MDNKKLLITGKILLAILYIIVLFAVCVLAAMAFLSLFGS--KLLDVDFFTLFLSDGIFKGGLMLGIVFFLVVLDASI-------------------
2L6C Chain:A ((1-104))
MSAIRDITTEAGMAHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRDGKVAKVFSGIMNPRELQALYASI
General information:
TITO was launched using:
RESULT:
Template:
2L6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79737 for 453 contacts (-176.0/contact) +
2D Compatibility (PS) -7837 + (NN) 459 + (LL) 0
1D Compatibility (HY) 4800 + (ID) 200
Total energy: -82515.0 ( -182.15 by residue)
QMean score : 0.130
(partial model without unconserved sides chains):
PDB file :
Tito_2L6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L6C-query.scw
PDB file :
Tito_Scwrl_2L6C.pdb
: