Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKNKFLLVSIVFIIIFVVQPQNFQSLKNIFTQNDIASQLNISSSPEEKNDGLGTAYQTQNEDLKSKSFDGQHQVIVV-NEKAQFTAEELSMRNGSWE--KYDNLDFLNRVGVAEAMLGKELMPKEARQDISSVKPTGWKNKKITFNGKQDYLYNRSHLIGFQLSGE--------NANVKNLFTGTRALNANFNDDKSSMVYYENEVANYIKKTNHHVRYRVTPLFKNV-ELVARGVRIEAQSIEDETISFDVYIFNGQPGYDIDYLTGSSEKIMITK |
| 3OWV Chain:A ((35-247)) | ---------------------------------------------------------AVKSQIKGSLEWNGS-GAFIVNGNKTNLDAKVSS---KPYADNKTKTVGKETVPTVANALLSKATRQY-------SWTPPGWHQVKNLK-GSYTHAVDRGALLGYALIGGLDGFDASTS-NPKNIAVQTAWANQAQAEYSTGQNYYESKVRKALDQ-NKRVRYRVTLYYASNEDLVPSASQIEAKSSDGE-LEFNVLVPNVQKGLQLDYRTGEVTVTQ--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3573 for 1555 contacts (-2.3/contact) +
2D Compatibility (PS) -20043 + (NN) -1155 + (LL) 5604
1D Compatibility (HY) -4800 + (ID) 2750
Total energy: -26717.0 ( -17.18 by residue)
QMean score : 0.283
|
|
|