Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKQLLVLSCVSAIALAGTTTFAEDVIPVDPAVPSTEVVTPPNSVDPSLPTDTTDPSTPVVPEKLPDTSKPAEPETPKEELPAPVDPTTPSAGKEDKQETVPGQAETPKEEVKPENPKSSEDKKKEELVPDNVSKDIIDKVDTTTGEVVFKPIPVTPDKTVIGTKDSQVIIRDQAGRTQVVTPESLGGHVNPNGTVTLKDATGAEKTLPKTGDKQSVLGYLGMMLISVLGYAVKKKVSH |
| 4JLD Chain:A ((44-86)) | ------------------------------------------------------------------------------------------------------------------PLGKKAKEYMERGELVPDDLIIALIEEVFPKHGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEVYREQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JLD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7720 for 191 contacts (40.4/contact) +
2D Compatibility (PS) -4410 + (NN) -2599 + (LL) 4616
1D Compatibility (HY) -3600 + (ID) 750
Total energy: 977.0 ( 5.12 by residue)
QMean score : 0.446
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