Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELSKRRQRQLKAQGYDLAFLSRIQPQGNIDFKKDDRSWMSGDGHHTVLHFYEYPSEDLDRFWLSDLMLIPGTRSFLSLYRANNRELKQEIKDAIEEKSTRITGNSKIVDNQQELDEIKDLTQLDREITKKNIAMLGMYVRNYSSSSTKEALFKKVEDIKDKTSNFKSTILSGELDFEYHAPFIPAQYQIDLPNRRRGIPIRAHDLAGGYFFNHTKLEDQRGVYMGWTPTKGAVNFNFLERDERRTRSFMILSGNPKMGQRSFLLKHTDGLYAKGNYIRNFDANGTFLDQTRQQHGLILDLSGEANRINIFQVFPTVTNEEGTEIDKKKSYKLHIEKLKSIFKLLNSEVTGDDLTTLGDMLNDFYIEEGLWARNPKLNPEKLKATDLVNDDYPILSDFILFADDYKRSLMAQSKPDEIEIKSVNRIYKTFNELLTTNAEMFEGTTEFQDISSEQVVTFDLSGLKGTPNLLNAQIFSVLSLVSADIVNNGKRSKQLLKANPHLTEMDMEHYIVNISEAQTLINPKYESSVELLADMIDTMGENFAGVVLSVNSLRGILFEAGAGNHKDPYVTAVQRIFGLMQYRVFAQTDETTIPLLANALTGSMNQSELETLPRLAKGQLFMNIAGVGNLVFNQQLLAPEIKRYGGIQ |
| 1R9Z Chain:A ((134-295)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNG-EALLEEALRL-GADVVG----------AIPHF-EFTREYGVESLHKTFALAQ-KYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVTAS-----HTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDSVFDPWYPLGTA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44720 for 1225 contacts (-36.5/contact) +
2D Compatibility (PS) -16242 + (NN) 461 + (LL) 26856
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -42245.0 ( -34.49 by residue)
QMean score : 0.144
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